LISA @ Université d'Angers
|Measured variables||disease, surface|
|Operating system||windows, mac, linux|
High throughput quantitative phenotyping of plant resistance using chlorophyll fluorescence image analysisCéline Rousseau, Etienne Belin, Edouard Bove, David Rousseau, Frédéric Fabre, Romain Berruyer, Jacky Guillaumès, Charles Manceau, Marie-Agnès Jacques, Tristan BoureauPlant Methods, 2013 View paper
Phenotic is an image analysis procedure for quantifying the leaf area impacted by the pathogen from chlorophyl fluorescence images. Based on the Fv/Fm values of each pixel of the image, a thresholding approach was developed to delimit diseased areas. In a perspective of high throughput phenotyping, the procedure was automated with the software R.
Source: BMC Plant Methods